Mycelium 365
    Migration Project

    Citrix to Azure Virtual Desktop

    Migrating from Citrix to Azure Virtual Desktop (AVD) replaces on-premises virtual desktop infrastructure with a Microsoft-managed cloud solution — Mycelium 365 handles the full Citrix to AVD migration for Australian organisations, delivering lower costs, better Microsoft 365 integration, and no hardware refresh cycles.

    Why Australian businesses are moving from Citrix to Azure Virtual Desktop

    Citrix's licensing changes since the Cloud Software Group acquisition have pushed per-user subscription costs sharply higher, and several legacy XenApp and XenDesktop SKUs are now on end-of-life or end-of-sale timelines — forcing Australian organisations to revisit their virtual desktop strategy. Azure Virtual Desktop has emerged as the natural successor: it is Microsoft-native, integrates directly with Microsoft 365, Teams media optimisation, Intune and Entra ID, and uses consumption-based billing that scales down outside business hours. For simpler single-user workloads, Windows 365 Cloud PC offers a fixed per-user alternative on the same Azure platform. Australian data residency is preserved through Azure Australia East and South East regions, and the cloud-native architecture maps cleanly to ACSC Essential Eight controls — patching, application control, MFA and admin privilege restriction — without bolting on third-party tooling.

    Citrix vs Azure Virtual Desktop — key differences

    The two platforms solve the same problem but with very different commercial and operational models.

    AreaCitrixAzure Virtual Desktop
    Licensing modelPer-user Universal subscription, annual commitmentConsumption-based Azure compute; Windows licence included with eligible M365 plans
    InfrastructureOn-premises or self-managed Citrix Delivery Controllers, StoreFront, NetScalerFully Microsoft-managed control plane; you only run the session hosts
    Microsoft 365 integrationRequires HDX optimisation pack and Citrix add-ons for TeamsNative Teams media optimisation, OneDrive, FSLogix profiles, Entra ID SSO
    Support modelCitrix vendor support plus partner; multiple escalation pathsSingle Microsoft support plane; Mycelium 365 as managed partner
    Indicative AUD cost (20 users)~$48k+ p.a. licensing + infra~$22–28k p.a. compute (autoscaled)
    Indicative AUD cost (50 users)~$110k+ p.a. licensing + infra~$55–70k p.a. compute (autoscaled)
    Indicative AUD cost (100 users)~$210k+ p.a. licensing + infra~$100–130k p.a. compute (autoscaled)

    Indicative ranges only — actual cost depends on session profile, reserved instance commitments and Microsoft 365 licensing.

    What does a Citrix to AVD migration involve?

    Every Mycelium 365 Citrix-to-AVD migration follows the same proven phases. We start with an assessment — a full application inventory, user profile analysis (Citrix UPM / Profile Management sizing), Citrix policy review and dependency mapping for any HDX-optimised workloads. From there we move to AVD environment build: host pools sized to your session profile, FSLogix profile containers on Azure Files or NetApp Files, image management via Azure Compute Gallery, Entra ID join, Intune compliance, and networking aligned to your existing ExpressRoute or VPN.

    A pilot migration moves a small representative user group across — typically 10–15% of the user base — so we can validate logon times, application behaviour, printing and Teams media performance on real workloads. Application testing covers every business-critical app, with MSIX app attach or App-V re-packaging where required.

    Once sign-off is achieved, the full cutover runs in waves with Citrix kept live as a fallback. Finally, we handle decommissioning of the Citrix Delivery Controllers, StoreFront, NetScalers and any on-premises session hosts — including licence cancellation guidance so you stop paying for what you no longer use.

    How long does a Citrix to AVD migration take?

    Most Australian Citrix-to-AVD migrations complete in 6 to 12 weeks end-to-end. A straightforward 50-user environment with a clean application set and standard FSLogix profiles typically lands inside 8 weeks, including assessment, pilot, cutover and Citrix decommissioning.

    Timeline is driven by application count and complexity, the volume of custom Citrix policies that need translating to Intune and Entra ID Conditional Access, the mix of BYOD versus corporate-managed devices, and whether the source environment includes published applications, full desktops or both.

    Mycelium 365 includes a 30-day hypercare period after cutover — daily check-ins, priority ticket handling, performance tuning of host pools and autoscaling, and end-user enablement sessions — before the environment transitions into ongoing managed services.

    Our Migration Process

    A structured four-phase approach to move from Citrix to Azure Virtual Desktop.

    Step 1

    Assessment

    We audit your Citrix environment — apps, user profiles, policies, and infrastructure — to plan a like-for-like or improved AVD deployment.

    Step 2

    AVD Design

    Architect your Azure Virtual Desktop environment including host pools, session types, networking, FSLogix profiles, and image management.

    Step 3

    Migration

    Migrate users, apps, and profiles in phased waves with parallel running to ensure zero disruption to daily operations.

    Step 4

    Handover & Optimisation

    Complete cutover, decommission Citrix, and fine-tune performance, cost, and security for ongoing operations.

    What We Migrate

    Every layer of your Citrix environment, re-architected for Azure Virtual Desktop.

    Virtual Desktops & Apps

    Published desktops and applications mapped from Citrix to AVD host pools — single-session and multi-session configurations.

    User Profiles & Data

    Citrix UPM or Profile Management migrated to FSLogix containers on Azure Files or Azure NetApp Files.

    Security & Policies

    Citrix policies translated to Azure Conditional Access, Intune compliance, and Microsoft Defender for Endpoint.

    Infrastructure & Networking

    On-premises Citrix infrastructure replaced with Azure-native networking, ExpressRoute or VPN connectivity, and autoscaling.

    Why Move to Azure Virtual Desktop?

    Eliminate costly Citrix licensing and infrastructure
    Native Azure AD integration with Conditional Access
    Scalable desktop pools that grow with your business
    Enhanced security with Microsoft Defender for Endpoint
    Optimised for Microsoft 365 and Teams
    Simplified management through a single Azure portal

    Citrix to Azure Virtual Desktop FAQs

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